The 2.0 version of rSNPBase

Variant report

Variant rs6698717
Chromosome Location chr1:47835150-47835151
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47800600-47854600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:47801000-47838200 Weak transcription NHDF-Ad bronchial
3 chr1:47801000-47850800 Weak transcription NHEK skin
4 chr1:47801200-47839000 Weak transcription Right Ventricle heart
5 chr1:47812200-47836800 Weak transcription NH-A brain
6 chr1:47814800-47850600 Weak transcription Aorta Aorta
7 chr1:47817400-47837000 Weak transcription A549 lung
8 chr1:47823000-47846400 Weak transcription Colonic Mucosa Colon
9 chr1:47824000-47851000 Weak transcription Stomach Mucosa stomach
10 chr1:47824000-47853800 Weak transcription Psoas Muscle Psoas
11 chr1:47827800-47854800 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:47830800-47836200 Weak transcription Small Intestine intestine
13 chr1:47830800-47838600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr1:47831000-47838600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:47831000-47838600 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr1:47831000-47840000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr1:47832200-47854200 Weak transcription Esophagus oesophagus
18 chr1:47832600-47836600 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr1:47832600-47838600 Weak transcription Rectal Smooth Muscle rectum
20 chr1:47832800-47839200 Weak transcription Brain Hippocampus Middle brain
21 chr1:47833000-47840600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:47833200-47852000 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:47833400-47844600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:47833600-47854200 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:47833600-47854200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr1:47833800-47842800 Strong transcription Primary B cells from peripheral blood blood
27 chr1:47834000-47835200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:47834000-47835200 Strong transcription HMEC breast
29 chr1:47834000-47836600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:47834000-47838600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:47834000-47840400 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:47834000-47847400 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr1:47834000-47847600 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:47834000-47847600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:47834000-47849200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:47834000-47849200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:47834000-47849200 Strong transcription Dnd41 blood
38 chr1:47834000-47849400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:47834200-47835200 Strong transcription H1 Cell Line embryonic stem cell
40 chr1:47834200-47835200 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr1:47834200-47835200 Strong transcription Primary B cells from cord blood blood
42 chr1:47834200-47835200 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr1:47834200-47835200 Strong transcription Brain Germinal Matrix brain
44 chr1:47834200-47835200 Strong transcription Ovary ovary
45 chr1:47834200-47835200 Strong transcription GM12878-XiMat blood
46 chr1:47834200-47835400 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr1:47834200-47835400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:47834200-47835400 Strong transcription Brain Inferior Temporal Lobe brain
49 chr1:47834200-47836000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:47834200-47836000 Strong transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015