Variant report

Variant	rs4381767
Chromosome Location	chr2:64043798-64043799
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1440005	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4507090	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs55736914	1.00[EUR][1000 genomes]
rs57531829	1.00[EUR][1000 genomes]
rs58504126	1.00[EUR][1000 genomes]
rs71393340	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834242	chr2:63891249-64045617	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1013375	chr2:63969820-64231550	ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:64029200-64045200	Weak transcription	Adipose Nuclei	Adipose
2	chr2:64034600-64046400	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr2:64041200-64044400	Enhancers	Muscle Satellite Cultured Cells	--
4	chr2:64041800-64045200	Weak transcription	HSMM	muscle
5	chr2:64041800-64045400	Weak transcription	HSMMtube	muscle
6	chr2:64041800-64047000	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr2:64041800-64054200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr2:64042000-64047000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr2:64042400-64046800	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr2:64042400-64046800	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr2:64042800-64046800	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr2:64042800-64046800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr2:64042800-64052400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr2:64043000-64043800	Weak transcription	Liver	Liver
15	chr2:64043000-64046600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr2:64043000-64047600	Weak transcription	NHLF	lung
17	chr2:64043200-64046400	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr2:64043400-64043800	Enhancers	NHDF-Ad	bronchial
19	chr2:64043400-64044000	Enhancers	Osteobl	bone
20	chr2:64043400-64044200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr2:64043600-64043800	Enhancers	Aorta	Aorta
22	chr2:64043600-64043800	Enhancers	Psoas Muscle	Psoas
23	chr2:64043600-64043800	Enhancers	Skeletal Muscle Female	skeletal muscle
24	chr2:64043600-64043800	Enhancers	NH-A	brain
25	chr2:64043600-64044000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr2:64043600-64044200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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