Variant report

Variant	rs4384206
Chromosome Location	chr1:214584209-214584210
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs4655249	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4655343	1.00[CHB][hapmap];0.90[JPT][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214557800-214589000	Weak transcription	Rectal Smooth Muscle	rectum
2	chr1:214560000-214592000	Weak transcription	Hela-S3	cervix
3	chr1:214567000-214587600	Weak transcription	HepG2	liver
4	chr1:214572600-214612600	Weak transcription	Fetal Intestine Small	intestine
5	chr1:214573800-214591000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr1:214574600-214588200	Weak transcription	Aorta	Aorta
7	chr1:214575000-214589400	Weak transcription	Colon Smooth Muscle	Colon
8	chr1:214575200-214589000	Weak transcription	Stomach Smooth Muscle	stomach
9	chr1:214575200-214591200	Weak transcription	Ovary	ovary
10	chr1:214575200-214592000	Weak transcription	Placenta	Placenta
11	chr1:214575200-214595800	Weak transcription	Fetal Kidney	kidney
12	chr1:214576800-214589000	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr1:214576800-214612200	Weak transcription	Fetal Intestine Large	intestine
14	chr1:214577000-214589400	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr1:214577400-214589000	Weak transcription	Psoas Muscle	Psoas
16	chr1:214577400-214591200	Weak transcription	Left Ventricle	heart
17	chr1:214577600-214586800	Weak transcription	Primary hematopoietic stem cells	blood
18	chr1:214578600-214585800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr1:214578600-214586200	Strong transcription	HSMM	muscle
20	chr1:214578600-214589000	Weak transcription	Right Ventricle	heart
21	chr1:214578600-214591200	Weak transcription	Esophagus	oesophagus
22	chr1:214578600-214591400	Weak transcription	Fetal Stomach	stomach
23	chr1:214578800-214588200	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr1:214578800-214589400	Weak transcription	NHLF	lung
25	chr1:214578800-214592600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr1:214578800-214592800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr1:214579000-214588800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr1:214579000-214589400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr1:214579400-214585600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr1:214579400-214586200	Strong transcription	HMEC	breast
31	chr1:214579400-214591200	Weak transcription	H1 Cell Line	embryonic stem cell
32	chr1:214580400-214588000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr1:214581400-214584600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr1:214581400-214584600	Strong transcription	Muscle Satellite Cultured Cells	--
35	chr1:214581400-214601200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr1:214581800-214585200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr1:214581800-214586600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr1:214582000-214585400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr1:214582000-214588800	Strong transcription	Osteobl	bone
40	chr1:214582200-214585400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr1:214582400-214585600	Strong transcription	HUES64 Cell Line	embryonic stem cell
42	chr1:214582800-214584400	Strong transcription	HUES48 Cell Line	embryonic stem cell
43	chr1:214582800-214585600	Strong transcription	NHDF-Ad	bronchial
44	chr1:214583200-214584600	Strong transcription	Duodenum Smooth Muscle	Duodenum
45	chr1:214583600-214584400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr1:214583800-214584400	ZNF genes & repeats	Adipose Nuclei	Adipose
47	chr1:214583800-214584400	Strong transcription	Fetal Muscle Leg	muscle
48	chr1:214583800-214584400	Strong transcription	NH-A	brain
49	chr1:214583800-214585400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr1:214583800-214586200	Strong transcription	HUVEC	blood vessel

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