Variant report

Variant	rs4408475
Chromosome Location	chr14:84810715-84810716
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10133470	0.87[ASN][1000 genomes]
rs10149295	0.93[ASN][1000 genomes]
rs11159651	0.87[ASN][1000 genomes]
rs12147513	0.87[ASN][1000 genomes]
rs12323478	0.87[ASN][1000 genomes]
rs28416397	0.83[ASN][1000 genomes]
rs28508568	0.83[ASN][1000 genomes]
rs4491440	0.86[ASN][1000 genomes]
rs4519279	0.87[ASN][1000 genomes]
rs73370910	0.93[ASN][1000 genomes]
rs73370959	0.92[ASN][1000 genomes]
rs73370965	0.92[ASN][1000 genomes]
rs73370994	0.87[ASN][1000 genomes]
rs73370995	0.87[ASN][1000 genomes]
rs8005705	0.87[ASN][1000 genomes]
rs8015805	0.87[ASN][1000 genomes]
rs8017538	0.85[ASN][1000 genomes]
rs8017719	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832845	chr14:84726378-84900199	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84809200-84810800	Enhancers	HUVEC	blood vessel
2	chr14:84809600-84810800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr14:84809800-84811200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr14:84810600-84811600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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