The 2.0 version of rSNPBase

Variant report

Variant rs4416442
Chromosome Location chr4:89866713-89866714
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:89825600-89878400 Weak transcription Primary hematopoietic stem cells blood
2 chr4:89850200-89878800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr4:89851400-89883600 Weak transcription Fetal Intestine Large intestine
4 chr4:89852400-89885000 Weak transcription Fetal Lung lung
5 chr4:89852600-89877800 Weak transcription Fetal Muscle Leg muscle
6 chr4:89852600-89879200 Weak transcription Fetal Stomach stomach
7 chr4:89852600-89879400 Weak transcription Fetal Muscle Trunk muscle
8 chr4:89856200-89869200 Weak transcription Left Ventricle heart
9 chr4:89856400-89872000 Weak transcription Aorta Aorta
10 chr4:89857000-89867800 Weak transcription Stomach Smooth Muscle stomach
11 chr4:89857800-89867200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr4:89857800-89868200 Weak transcription Placenta Placenta
13 chr4:89857800-89869600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:89857800-89872000 Weak transcription Pancreas Pancrea
15 chr4:89857800-89879400 Weak transcription Lung lung
16 chr4:89859600-89867400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr4:89859600-89872000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr4:89859600-89877800 Weak transcription Fetal Intestine Small intestine
19 chr4:89860000-89867600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr4:89861600-89873200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr4:89861600-89874600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr4:89863000-89874600 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr4:89864000-89867400 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr4:89864400-89881400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr4:89864800-89870400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr4:89865400-89869200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr4:89865400-89870200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr4:89865400-89874600 Weak transcription Primary T cells from cord blood blood
29 chr4:89865600-89870800 Weak transcription Ovary ovary
30 chr4:89865600-89878400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr4:89865800-89870400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:89866000-89866800 Enhancers Cortex derived primary cultured neurospheres brain
33 chr4:89866400-89866800 Enhancers HUES48 Cell Line embryonic stem cell
34 chr4:89866400-89866800 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr4:89866400-89866800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr4:89866600-89867600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr4:89866600-89869400 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015