Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10867967	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10867971	0.80[ASN][1000 genomes]
rs10867973	0.80[ASN][1000 genomes]
rs10867975	0.84[EUR][1000 genomes]
rs10867976	0.86[EUR][1000 genomes]
rs10867977	0.80[EUR][1000 genomes]
rs11140004	0.80[ASN][1000 genomes]
rs11795034	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11795096	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1323784	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1535752	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1535753	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1544064	0.82[ASN][1000 genomes]
rs2209187	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2209188	0.87[EUR][1000 genomes]
rs2378658	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3739658	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4877751	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72743036	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs942278	0.87[EUR][1000 genomes]
rs942279	0.83[EUR][1000 genomes]
rs942280	0.87[EUR][1000 genomes]
rs942282	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs942283	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046491	chr9:85861492-86063992	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv6586	chr9:85869828-85914812	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85854800-85890400	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr9:85855000-85881400	Weak transcription	Adipose Nuclei	Adipose
3	chr9:85856200-85910600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr9:85866200-85913000	Weak transcription	Aorta	Aorta
5	chr9:85876200-85880400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr9:85876600-85880400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr9:85876600-85881400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr9:85877200-85881400	Weak transcription	Ovary	ovary
9	chr9:85877600-85880400	Enhancers	HUVEC	blood vessel
10	chr9:85877800-85881400	Weak transcription	Fetal Muscle Trunk	muscle
11	chr9:85878000-85880600	Weak transcription	Right Atrium	heart
12	chr9:85878200-85881200	Weak transcription	Right Ventricle	heart
13	chr9:85879200-85881400	Active TSS	Skeletal Muscle Male	skeletal muscle
14	chr9:85879800-85881800	Active TSS	Fetal Heart	heart
15	chr9:85880000-85880200	Enhancers	Left Ventricle	heart
16	chr9:85880000-85881400	Weak transcription	Psoas Muscle	Psoas

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