Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:90767591..90770348-chr1:90770465..90772590,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10754300	0.97[ASN][1000 genomes]
rs10801800	0.85[ASN][1000 genomes]
rs10922818	0.98[ASN][1000 genomes]
rs10922819	0.98[ASN][1000 genomes]
rs12021593	0.97[ASN][1000 genomes]
rs12046150	0.97[ASN][1000 genomes]
rs12058249	0.98[ASN][1000 genomes]
rs12060187	0.98[ASN][1000 genomes]
rs12733919	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3923534	0.98[ASN][1000 genomes]
rs4128959	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4233435	0.98[ASN][1000 genomes]
rs4417049	0.98[ASN][1000 genomes]
rs4440840	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4507991	0.87[ASN][1000 genomes]
rs4535988	1.00[CHB][hapmap];0.88[JPT][hapmap];0.97[ASN][1000 genomes]
rs4623679	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4658150	0.90[ASN][1000 genomes]
rs6428584	0.97[ASN][1000 genomes]
rs6679092	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6689390	0.98[ASN][1000 genomes]
rs6689724	0.98[ASN][1000 genomes]
rs6690274	0.97[ASN][1000 genomes]
rs6694176	0.96[ASN][1000 genomes]
rs7531149	0.97[ASN][1000 genomes]
rs7548218	0.96[ASN][1000 genomes]
rs9651073	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546803	chr1:90679734-90777717	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv524317	chr1:90729744-90836739	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv521123	chr1:90770566-90836739	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90770800-90777600	Weak transcription	Fetal Brain Male	brain

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