Variant report

Variant	rs4441234
Chromosome Location	chr15:83946290-83946291
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1989	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34256265	1.00[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs36070450	1.00[ASN][1000 genomes]
rs62010249	1.00[ASN][1000 genomes]
rs71412295	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534418	chr15:83770116-83960718	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83933000-83951200	Weak transcription	HSMMtube	muscle
2	chr15:83933600-83951600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr15:83933600-83951600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr15:83936000-83946400	Weak transcription	NHDF-Ad	bronchial
5	chr15:83936400-83946600	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr15:83939800-83948200	Weak transcription	HSMM	muscle
7	chr15:83943800-83948000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr15:83944200-83948200	Genic enhancers	NHEK	skin
9	chr15:83944400-83948200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr15:83944400-83948800	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr15:83945000-83947200	Enhancers	HMEC	breast
12	chr15:83945000-83950800	Weak transcription	Osteobl	bone
13	chr15:83945000-83951000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr15:83945200-83948200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr15:83945600-83951600	Weak transcription	Esophagus	oesophagus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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