Variant report

Variant	rs4447
Chromosome Location	chr22:33275140-33275141
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12166948	0.91[CHB][hapmap]
rs12170951	0.83[CHB][hapmap]
rs137507	0.90[CEU][hapmap];0.83[CHB][hapmap];0.86[EUR][1000 genomes]
rs137525	0.90[CEU][hapmap];0.83[CHB][hapmap];0.80[EUR][1000 genomes]
rs137530	0.88[CEU][hapmap];0.81[CHB][hapmap];0.83[EUR][1000 genomes]
rs4452	0.85[EUR][1000 genomes]
rs80693	0.81[CEU][hapmap];0.83[CHB][hapmap];0.83[EUR][1000 genomes]
rs9619317	0.81[CHB][hapmap]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33237400-33282200	Weak transcription	Fetal Brain Female	brain
2	chr22:33257800-33282000	Weak transcription	HepG2	liver
3	chr22:33265200-33282000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr22:33265600-33287000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr22:33270800-33287200	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr22:33271200-33276200	Weak transcription	Lung	lung
7	chr22:33271400-33276200	Weak transcription	Fetal Muscle Trunk	muscle
8	chr22:33271600-33276600	Weak transcription	Thymus	Thymus
9	chr22:33272000-33276000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr22:33272000-33276400	Weak transcription	Spleen	Spleen
11	chr22:33272200-33275400	Weak transcription	Fetal Thymus	thymus
12	chr22:33272400-33275400	Weak transcription	Primary hematopoietic stem cells	blood
13	chr22:33273800-33276200	Weak transcription	Right Atrium	heart
14	chr22:33274000-33275400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr22:33274200-33286200	Enhancers	Fetal Heart	heart
16	chr22:33274400-33277600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr22:33274800-33275200	Enhancers	K562	blood
18	chr22:33275000-33280200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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