Variant report

Variant	rs4447762
Chromosome Location	chr3:133820220-133820221
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs4234422	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs4234423	0.87[AMR][1000 genomes]
rs4234424	0.90[AMR][1000 genomes]
rs4234426	0.90[AMR][1000 genomes]
rs4384945	0.81[EUR][1000 genomes]
rs4408870	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4470517	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4682655	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs4682665	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs4682672	0.82[AMR][1000 genomes]
rs4854617	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4854618	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4854619	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4854810	0.80[EUR][1000 genomes]
rs4854813	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55688777	0.87[AMR][1000 genomes]
rs56104814	0.86[AMR][1000 genomes]
rs56205980	0.87[AMR][1000 genomes]
rs62271183	0.87[AMR][1000 genomes]
rs6439459	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6439471	0.83[AMR][1000 genomes]
rs6764932	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6779423	0.82[AMR][1000 genomes]
rs6787345	0.82[AMR][1000 genomes]
rs6795532	0.93[AMR][1000 genomes]
rs6795658	0.90[AMR][1000 genomes]
rs6799962	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs71807032	0.87[AMR][1000 genomes]
rs7431604	0.87[AMR][1000 genomes]
rs7433368	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs7611104	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7627059	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7633386	0.87[AMR][1000 genomes]
rs7634265	0.90[AMR][1000 genomes]
rs9289461	0.90[AMR][1000 genomes]
rs9812346	0.90[AMR][1000 genomes]
rs9843401	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9862959	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv965344	chr3:133805086-133862489	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133820200-133821000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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