Variant report

Variant	rs445051
Chromosome Location	chr21:41499791-41499792
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2837448	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs387213	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs392167	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs397565	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs406398	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs408999	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs430433	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs431425	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs444436	0.91[ASN][1000 genomes]
rs445822	0.84[AMR][1000 genomes]
rs448324	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs449023	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs451658	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7281745	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9975693	0.97[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41491800-41510200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr21:41492400-41510400	Weak transcription	Fetal Brain Female	brain
3	chr21:41493000-41510200	Weak transcription	Brain Angular Gyrus	brain
4	chr21:41494200-41511600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr21:41494800-41506000	Weak transcription	Brain Cingulate Gyrus	brain
6	chr21:41498400-41510200	Weak transcription	Fetal Muscle Trunk	muscle
7	chr21:41499000-41501000	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr21:41499000-41504600	Weak transcription	Fetal Muscle Leg	muscle
9	chr21:41499000-41517200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr21:41499600-41503000	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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