Variant report

Variant	rs4463275
Chromosome Location	chr6:144452571-144452572
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12199227	0.81[ASN][1000 genomes]
rs12204782	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12208207	0.91[ASN][1000 genomes]
rs13195952	0.82[ASN][1000 genomes]
rs17073406	1.00[AFR][1000 genomes]
rs34652974	0.91[ASN][1000 genomes]
rs4896699	0.82[ASN][1000 genomes]
rs6916177	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs990308	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3449955	chr6:144452509-144454707	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144451000-144453000	Enhancers	HMEC	breast
2	chr6:144451200-144453000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:144451200-144453000	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr6:144451200-144453000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:144451200-144460400	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr6:144451600-144453000	Enhancers	GM12878-XiMat	blood
7	chr6:144451800-144452600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
8	chr6:144451800-144453000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr6:144451800-144453000	Enhancers	NHDF-Ad	bronchial
10	chr6:144451800-144453000	Enhancers	Osteobl	bone
11	chr6:144451800-144453200	Enhancers	HUVEC	blood vessel
12	chr6:144452000-144452600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr6:144452000-144452600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr6:144452000-144452600	Flanking Active TSS	NHEK	skin
15	chr6:144452000-144453000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:144452000-144453000	Enhancers	NH-A	brain
17	chr6:144452000-144453200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr6:144452000-144453200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr6:144452200-144452800	Enhancers	A549	lung
20	chr6:144452400-144452600	Enhancers	Hela-S3	cervix
21	chr6:144452400-144453000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr6:144452400-144453200	Enhancers	Muscle Satellite Cultured Cells	--
23	chr6:144452400-144456200	Weak transcription	NHLF	lung

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