The 2.0 version of rSNPBase
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Variant report
Variant
rs4464215
Chromosome Location
chr2:141285320-141285321
allele
A/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
No data
No data
No data
No data
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:4)
rs_ID
r
2
[population]
rs16844127
1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16844139
0.92[YRI][hapmap]
rs16844143
1.00[YRI][hapmap]
rs16856025
1.00[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv2756334
chr2:141166521-141285622
Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats
n/a
n/a
inside rSNPs
n/a
2
nsv433205
chr2:141270270-141285694
Enhancers
n/a
n/a
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
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