Variant report

Variant	rs4482329
Chromosome Location	chr17:63459143-63459144
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:63456566..63460095-chr17:63461985..63464901,3	MCF-7	breast:
2	chr17:63458671..63461381-chr17:63463041..63465127,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12947579	0.96[EUR][1000 genomes]
rs4563070	0.89[EUR][1000 genomes]
rs4791188	0.81[EUR][1000 genomes]
rs7224031	0.81[EUR][1000 genomes]
rs8069284	0.81[EUR][1000 genomes]
rs9908987	0.82[EUR][1000 genomes]
rs9909481	0.82[EUR][1000 genomes]
rs9910104	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056195	chr17:63439524-63512389	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63452800-63459600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr17:63453200-63459400	Weak transcription	Fetal Lung	lung
3	chr17:63455200-63460400	Weak transcription	Right Ventricle	heart
4	chr17:63456200-63459400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr17:63456400-63461400	Weak transcription	Lung	lung
6	chr17:63456600-63459200	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr17:63456600-63459400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr17:63456600-63459400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr17:63456600-63461600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr17:63456600-63467600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr17:63456800-63459200	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr17:63456800-63459400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr17:63457400-63459200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr17:63457400-63459200	Weak transcription	Placenta	Placenta
15	chr17:63457400-63459400	Weak transcription	Fetal Thymus	thymus
16	chr17:63457400-63460000	Weak transcription	Aorta	Aorta
17	chr17:63457600-63459200	Weak transcription	Left Ventricle	heart
18	chr17:63457800-63459400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr17:63457800-63460600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr17:63458000-63461200	Weak transcription	Right Atrium	heart
21	chr17:63458400-63460000	Enhancers	Fetal Heart	heart

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