Variant report
Variant | rs4492171 |
---|---|
Chromosome Location | chr6:91786031-91786032 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:91776668..91779603-chr6:91785078..91787430,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11962583 | 0.91[ASN][1000 genomes] |
rs11966543 | 0.91[ASN][1000 genomes] |
rs16883967 | 1.00[ASN][1000 genomes] |
rs16883969 | 1.00[ASN][1000 genomes] |
rs16883970 | 1.00[ASN][1000 genomes] |
rs16883972 | 0.91[ASN][1000 genomes] |
rs62417844 | 0.91[ASN][1000 genomes] |
rs6901237 | 0.91[ASN][1000 genomes] |
rs6907560 | 1.00[ASN][1000 genomes] |
rs6912628 | 0.91[ASN][1000 genomes] |
rs6913089 | 0.91[ASN][1000 genomes] |
rs6913485 | 0.91[ASN][1000 genomes] |
rs6913588 | 1.00[ASN][1000 genomes] |
rs6924218 | 0.91[ASN][1000 genomes] |
rs6924814 | 0.91[ASN][1000 genomes] |
rs6925219 | 0.91[ASN][1000 genomes] |
rs6938432 | 0.91[ASN][1000 genomes] |
rs7754397 | 0.86[AFR][1000 genomes] |
rs7766974 | 0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9451569 | 0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv523939 | chr6:91067623-91790493 | Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 12 gene(s) | inside rSNPs | diseases |
2 | esv2752130 | chr6:91740447-92196479 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
3 | nsv830726 | chr6:91750692-91921838 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
4 | nsv1031681 | chr6:91784557-92075312 | Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
5 | nsv538359 | chr6:91784557-92075312 | Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:91781200-91789600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |