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Variant report
Variant
rs4502656
Chromosome Location
chr4:47390465-47390466
allele
G/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr4:47389212..47391216-chr4:47392667..47395533,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 6 )
Associated traits (count: 1 )
rSNPs within LD-proxies of this variant (count:5)
rs_ID
r
2
[population]
rs4336202
1.00[CHB][hapmap]
rs4495019
0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4695229
1.00[CHB][hapmap]
rs6289
1.00[CHB][hapmap]
rs7690580
0.90[GIH][hapmap]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv998919
chr4:47207023-47476876
Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
TF binding regionCpG islandChromatin interactive regionlncRNA
6 gene(s)
inside rSNPs
diseases
mRNA abundance (count:1)
SNP
Gene
Cis/trans
Tissue
Source
rs4502656
CORIN
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links