Variant report

Variant rs45487397
Chromosome Location chr22:28143685-28143686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28137800-28145000 Weak transcription Pancreas Pancrea
2 chr22:28139400-28144800 Weak transcription Aorta Aorta
3 chr22:28140600-28145000 Weak transcription Fetal Brain Female brain
4 chr22:28140800-28143800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr22:28141200-28147200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
6 chr22:28141400-28143800 Weak transcription Fetal Stomach stomach
7 chr22:28141400-28144200 Weak transcription Stomach Smooth Muscle stomach
8 chr22:28141400-28145200 Enhancers H9 Cell Line embryonic stem cell
9 chr22:28141600-28144800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr22:28141600-28144800 Enhancers HUES6 Cell Line embryonic stem cell
11 chr22:28142000-28144000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr22:28142200-28144600 Weak transcription Primary hematopoietic stem cells blood
13 chr22:28142200-28144600 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr22:28142200-28144800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:28142200-28145000 Weak transcription Fetal Muscle Trunk muscle
16 chr22:28142200-28145400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr22:28142600-28143800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr22:28143000-28143800 Strong transcription Brain Germinal Matrix brain
19 chr22:28143000-28144000 Weak transcription Fetal Brain Male brain
20 chr22:28143000-28144000 Enhancers Placenta Placenta
21 chr22:28143000-28144800 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr22:28143000-28148400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr22:28143200-28144000 Enhancers H1 Cell Line embryonic stem cell
24 chr22:28143200-28144000 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr22:28143200-28144200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr22:28143200-28144400 Enhancers Skeletal Muscle Female skeletal muscle
27 chr22:28143200-28144800 Enhancers Hela-S3 cervix
28 chr22:28143200-28151000 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr22:28143400-28144200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr22:28143400-28144200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr22:28143400-28144200 Enhancers Right Atrium heart
32 chr22:28143400-28144600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr22:28143400-28144600 Enhancers Fetal Lung lung
34 chr22:28143400-28144600 Enhancers HMEC breast
35 chr22:28143400-28144800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr22:28143400-28144800 Enhancers Ovary ovary
37 chr22:28143400-28151400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr22:28143600-28143800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr22:28143600-28143800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr22:28143600-28143800 Enhancers Left Ventricle heart
41 chr22:28143600-28144000 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr22:28143600-28144400 Enhancers NHDF-Ad bronchial
43 chr22:28143600-28144800 Enhancers HUES64 Cell Line embryonic stem cell
44 chr22:28143600-28145200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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