Variant report

Variant rs4549534
Chromosome Location chr5:43467074-43467075
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43433800-43483400 Weak transcription Gastric stomach
2 chr5:43444000-43482600 Weak transcription HMEC breast
3 chr5:43444200-43472600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:43444800-43482600 Weak transcription Rectal Smooth Muscle rectum
5 chr5:43448200-43467400 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr5:43448200-43471800 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr5:43453800-43482600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr5:43454000-43482400 Weak transcription Osteobl bone
9 chr5:43454800-43482800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr5:43460400-43467400 Weak transcription HUVEC blood vessel
11 chr5:43460400-43472600 Weak transcription Fetal Kidney kidney
12 chr5:43460600-43471600 Weak transcription NHDF-Ad bronchial
13 chr5:43460600-43472000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr5:43461000-43470000 Weak transcription HSMMtube muscle
15 chr5:43461000-43482400 Weak transcription NHLF lung
16 chr5:43461200-43468000 Weak transcription Thymus Thymus
17 chr5:43461200-43482800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr5:43461200-43483400 Weak transcription Pancreas Pancrea
19 chr5:43461600-43469800 Weak transcription HSMM muscle
20 chr5:43462200-43467400 Weak transcription NHEK skin
21 chr5:43462200-43467600 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:43462200-43474000 Weak transcription Lung lung
23 chr5:43462200-43482600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr5:43462200-43482600 Weak transcription Fetal Stomach stomach
25 chr5:43462200-43482800 Weak transcription Right Ventricle heart
26 chr5:43462400-43483000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr5:43462400-43483400 Weak transcription Spleen Spleen
28 chr5:43462600-43467400 Weak transcription Hela-S3 cervix
29 chr5:43464000-43467800 Weak transcription Fetal Thymus thymus
30 chr5:43464200-43480000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr5:43465000-43470200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr5:43465600-43467600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr5:43465600-43481200 Weak transcription HepG2 liver
34 chr5:43465800-43467400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
35 chr5:43465800-43468000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:43466000-43468200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr5:43466200-43467200 ZNF genes & repeats Primary hematopoietic stem cells blood
38 chr5:43466200-43467400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr5:43466200-43467600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
40 chr5:43466200-43467800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr5:43466200-43468000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:43466200-43468000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr5:43466200-43468000 ZNF genes & repeats GM12878-XiMat blood
44 chr5:43466200-43468000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
45 chr5:43466200-43468200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr5:43466200-43468200 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr5:43466200-43468200 ZNF genes & repeats Liver Liver
48 chr5:43466200-43468200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
49 chr5:43466200-43468200 ZNF genes & repeats Dnd41 blood
50 chr5:43466200-43468600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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