Variant report

Variant rs7717328
Chromosome Location chr5:43554939-43554940
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43524000-43555200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
2 chr5:43527600-43555600 Strong transcription Fetal Thymus thymus
3 chr5:43527600-43556000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:43542800-43556000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr5:43542800-43556000 Weak transcription Esophagus oesophagus
6 chr5:43547600-43555200 Weak transcription Colonic Mucosa Colon
7 chr5:43547800-43556000 Weak transcription Gastric stomach
8 chr5:43548000-43555200 Weak transcription Placenta Amnion Placenta Amnion
9 chr5:43548000-43556000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:43548200-43555200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:43549600-43555400 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr5:43549600-43555800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr5:43549600-43556200 Weak transcription Spleen Spleen
14 chr5:43550200-43556000 Weak transcription Lung lung
15 chr5:43550400-43555400 Genic enhancers Primary T helper cells PMA-I stimulated --
16 chr5:43550400-43555600 Genic enhancers Primary T helper cells fromperipheralblood blood
17 chr5:43550800-43555000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr5:43551200-43555800 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr5:43551600-43555200 Genic enhancers Breast Myoepithelial Primary Cells Breast
20 chr5:43551800-43555000 Strong transcription Placenta Placenta
21 chr5:43552400-43555000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:43552400-43555200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr5:43552400-43556000 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr5:43552800-43555000 Strong transcription Fetal Muscle Trunk muscle
25 chr5:43552800-43555600 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr5:43552800-43555600 Genic enhancers Adipose Nuclei Adipose
27 chr5:43552800-43556000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr5:43553200-43555400 Enhancers Small Intestine intestine
29 chr5:43553200-43555600 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr5:43553200-43556000 Transcr. at gene 5' and 3' Dnd41 blood
31 chr5:43553400-43555200 Enhancers Brain Anterior Caudate brain
32 chr5:43553400-43555400 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr5:43553600-43555000 Genic enhancers Liver Liver
34 chr5:43553600-43555000 Transcr. at gene 5' and 3' GM12878-XiMat blood
35 chr5:43553600-43555400 Genic enhancers Brain Inferior Temporal Lobe brain
36 chr5:43553600-43556000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
37 chr5:43553800-43555200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr5:43553800-43555400 Genic enhancers Osteobl bone
39 chr5:43553800-43555600 Genic enhancers Primary hematopoietic stem cells blood
40 chr5:43553800-43555800 Enhancers Brain Hippocampus Middle brain
41 chr5:43553800-43556000 Enhancers Primary mononuclear cells fromperipheralblood Blood
42 chr5:43553800-43556000 Enhancers Skeletal Muscle Male skeletal muscle
43 chr5:43554000-43555000 Genic enhancers Primary T cells fromperipheralblood blood
44 chr5:43554000-43555000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr5:43554000-43555000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:43554000-43555000 Enhancers Fetal Stomach stomach
47 chr5:43554000-43555000 Enhancers Ovary ovary
48 chr5:43554000-43555000 Enhancers Pancreas Pancrea
49 chr5:43554000-43555000 Transcr. at gene 5' and 3' Psoas Muscle Psoas
50 chr5:43554000-43555200 Genic enhancers HMEC breast

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