Variant report

Variant	rs4551412
Chromosome Location	chr8:91357816-91357817
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91355349..91357838-chr8:91359194..91361170,2	K562	blood:
2	chr8:91340563..91342702-chr8:91356361..91357965,2	K562	blood:
3	chr8:91356198..91358109-chr8:91358342..91361071,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10956588	1.00[CEU][hapmap];0.86[MEX][hapmap];0.87[EUR][1000 genomes]
rs10956606	1.00[CEU][hapmap];0.87[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.93[EUR][1000 genomes]
rs11991337	0.93[EUR][1000 genomes]
rs11996534	1.00[CEU][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12541215	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12542044	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12543683	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12543750	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12546505	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs12677080	0.87[EUR][1000 genomes]
rs2205153	0.90[EUR][1000 genomes]
rs4422814	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4560835	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57808255	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59229746	0.90[ASN][1000 genomes]
rs6984328	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6989642	0.90[EUR][1000 genomes]
rs7003176	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7004083	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73312729	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73312731	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73312758	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73312787	0.93[EUR][1000 genomes]
rs7822920	0.94[ASN][1000 genomes]
rs7825634	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7830901	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7840137	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018991	chr8:91336887-91374274	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91352000-91364400	Weak transcription	K562	blood
2	chr8:91355200-91358000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:91355200-91358400	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr8:91355400-91358000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:91355600-91358600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr8:91355800-91358000	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr8:91355800-91358000	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr8:91356200-91358200	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr8:91356400-91358000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
10	chr8:91356400-91358000	Enhancers	H1 Cell Line	embryonic stem cell
11	chr8:91356600-91358000	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr8:91357000-91358000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr8:91357200-91358000	Enhancers	HMEC	breast
14	chr8:91357200-91358200	Enhancers	NH-A	brain
15	chr8:91357400-91358000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr8:91357400-91358000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr8:91357600-91358000	Enhancers	H9 Cell Line	embryonic stem cell
18	chr8:91357600-91358000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr8:91357600-91358000	Enhancers	Brain Anterior Caudate	brain
20	chr8:91357800-91358000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr8:91357800-91358200	Enhancers	iPS-20b Cell Line	embryonic stem cell
22	chr8:91357800-91358400	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr8:91357800-91363200	Weak transcription	Fetal Stomach	stomach

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