Variant report

Variant	rs59229746
Chromosome Location	chr8:91347689-91347690
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10956588	0.83[ASN][1000 genomes]
rs10956606	0.86[ASN][1000 genomes]
rs11991337	0.86[ASN][1000 genomes]
rs11996534	0.95[ASN][1000 genomes]
rs12541215	0.95[ASN][1000 genomes]
rs12542044	0.97[ASN][1000 genomes]
rs12543683	0.90[ASN][1000 genomes]
rs12543750	0.92[ASN][1000 genomes]
rs12546505	0.83[ASN][1000 genomes]
rs4422814	0.90[ASN][1000 genomes]
rs4551412	0.90[ASN][1000 genomes]
rs4560835	0.90[ASN][1000 genomes]
rs57808255	0.92[ASN][1000 genomes]
rs6984328	0.97[ASN][1000 genomes]
rs6989642	0.85[ASN][1000 genomes]
rs7003176	0.98[ASN][1000 genomes]
rs7004083	0.95[ASN][1000 genomes]
rs73312729	0.96[ASN][1000 genomes]
rs73312731	0.97[ASN][1000 genomes]
rs73312758	0.90[ASN][1000 genomes]
rs73312787	0.86[ASN][1000 genomes]
rs7822920	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7825634	0.93[ASN][1000 genomes]
rs7830901	0.93[ASN][1000 genomes]
rs7840137	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018991	chr8:91336887-91374274	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91337000-91353200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:91345600-91350600	Weak transcription	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links