Variant report

Variant	rs4555002
Chromosome Location	chr13:93235326-93235327
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs6492618	0.94[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs727987	0.85[AFR][1000 genomes]
rs7319083	0.94[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs7991812	0.89[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs9523717	0.88[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs9523718	0.92[ASN][1000 genomes]
rs9589583	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456070	chr13:93208593-93298523	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv562730	chr13:93208593-93298523	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv1808762	chr13:93232301-93241744	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv1842146	chr13:93232301-93241744	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93226200-93235600	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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