Variant report

Variant	rs7991812
Chromosome Location	chr13:93226278-93226279
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12430310	0.83[CHB][hapmap]
rs12583960	0.83[CHB][hapmap]
rs1333674	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs4528437	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs4555002	0.89[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs606022	0.83[CHB][hapmap]
rs6492618	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs727987	0.94[YRI][hapmap];0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7319083	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7989450	0.82[ASN][1000 genomes]
rs9523709	0.83[CHB][hapmap]
rs9523717	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9561081	0.84[CHB][hapmap]
rs9589583	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456070	chr13:93208593-93298523	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv562730	chr13:93208593-93298523	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93226000-93226400	Enhancers	Fetal Intestine Large	intestine
2	chr13:93226000-93227200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr13:93226200-93228600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr13:93226200-93235600	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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