Variant report

Variant rs455538
Chromosome Location chr5:9529418-9529419
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:9513000-9532800 Weak transcription Fetal Stomach stomach
2 chr5:9513000-9535200 Weak transcription Aorta Aorta
3 chr5:9520400-9532800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:9521200-9544400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:9524000-9532800 Weak transcription NH-A brain
6 chr5:9524000-9532800 Weak transcription NHLF lung
7 chr5:9524000-9533200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr5:9524000-9534400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:9524200-9533000 Weak transcription Osteobl bone
10 chr5:9524600-9533200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:9525400-9542000 Weak transcription Small Intestine intestine
12 chr5:9526600-9529600 Genic enhancers Breast Myoepithelial Primary Cells Breast
13 chr5:9526600-9531200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr5:9527200-9529600 Strong transcription Cortex derived primary cultured neurospheres brain
15 chr5:9527600-9530000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:9527600-9531200 Weak transcription Placenta Amnion Placenta Amnion
17 chr5:9528000-9530000 Weak transcription Fetal Heart heart
18 chr5:9528400-9530400 Enhancers Psoas Muscle Psoas
19 chr5:9528400-9530400 Enhancers Rectal Mucosa Donor 31 rectum
20 chr5:9528400-9531800 Enhancers Left Ventricle heart
21 chr5:9528400-9544200 Weak transcription Fetal Intestine Small intestine
22 chr5:9528600-9529600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr5:9528600-9529600 Enhancers Pancreas Pancrea
24 chr5:9528600-9530200 Enhancers Right Atrium heart
25 chr5:9528600-9530400 Enhancers Skeletal Muscle Female skeletal muscle
26 chr5:9528600-9531800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr5:9528600-9532000 Enhancers Fetal Muscle Leg muscle
28 chr5:9528800-9530200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr5:9528800-9530200 Enhancers NHDF-Ad bronchial
30 chr5:9528800-9531000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr5:9529000-9529600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:9529000-9530200 Enhancers Liver Liver
33 chr5:9529000-9530400 Enhancers Sigmoid Colon Sigmoid Colon
34 chr5:9529000-9531800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:9529000-9533000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr5:9529200-9529600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr5:9529200-9529600 Enhancers Colonic Mucosa Colon
38 chr5:9529200-9529600 Enhancers Spleen Spleen
39 chr5:9529200-9530200 Enhancers Adipose Nuclei Adipose
40 chr5:9529200-9530200 Enhancers Rectal Mucosa Donor 29 rectum
41 chr5:9529200-9530400 Enhancers Fetal Muscle Trunk muscle
42 chr5:9529200-9532000 Enhancers Right Ventricle heart
43 chr5:9529400-9529600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
44 chr5:9529400-9530200 Enhancers Lung lung
45 chr5:9529400-9530400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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