Variant report

Variant rs268548
Chromosome Location chr5:9532868-9532869
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:9513000-9535200 Weak transcription Aorta Aorta
2 chr5:9521200-9544400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:9524000-9533200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr5:9524000-9534400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:9524200-9533000 Weak transcription Osteobl bone
6 chr5:9524600-9533200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr5:9525400-9542000 Weak transcription Small Intestine intestine
8 chr5:9528400-9544200 Weak transcription Fetal Intestine Small intestine
9 chr5:9529000-9533000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:9529600-9533000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:9529600-9533200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr5:9529600-9534000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr5:9529600-9534200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr5:9529600-9534600 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr5:9529600-9544400 Weak transcription Pancreas Pancrea
16 chr5:9529600-9544800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr5:9530200-9533000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr5:9530200-9533000 Weak transcription NHDF-Ad bronchial
19 chr5:9530200-9534600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:9530200-9543600 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:9530200-9544600 Weak transcription Lung lung
22 chr5:9530400-9534200 Weak transcription Fetal Muscle Trunk muscle
23 chr5:9530400-9544200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr5:9530400-9544800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:9531000-9533000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr5:9531600-9533000 Weak transcription Placenta Amnion Placenta Amnion
27 chr5:9531800-9533000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr5:9531800-9533400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr5:9531800-9534000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr5:9531800-9534200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:9531800-9534200 Weak transcription Left Ventricle heart
32 chr5:9532000-9533000 Weak transcription HMEC breast
33 chr5:9532000-9534600 Weak transcription Right Atrium heart
34 chr5:9532000-9536000 Weak transcription Right Ventricle heart
35 chr5:9532400-9533600 Enhancers Fetal Muscle Leg muscle
36 chr5:9532800-9533000 Active TSS HSMMtube muscle
37 chr5:9532800-9533200 Flanking Active TSS NHLF lung
38 chr5:9532800-9533400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr5:9532800-9533400 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr5:9532800-9533400 Flanking Active TSS Fetal Heart heart
41 chr5:9532800-9533400 Enhancers Fetal Lung lung
42 chr5:9532800-9533400 Enhancers Fetal Stomach stomach
43 chr5:9532800-9533600 Enhancers Skeletal Muscle Female skeletal muscle
44 chr5:9532800-9534200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
45 chr5:9532800-9534200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr5:9532800-9534200 Enhancers NH-A brain
47 chr5:9532800-9536000 Enhancers HUES64 Cell Line embryonic stem cell

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