The 2.0 version of rSNPBase

Variant report

Variant rs45569734
Chromosome Location chr1:171292819-171292820
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171283600-171293000 Weak transcription Brain Angular Gyrus brain
2 chr1:171283600-171297800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:171283800-171293000 Weak transcription Brain Substantia Nigra brain
4 chr1:171284000-171294600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:171284000-171295200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:171284000-171295400 Weak transcription Stomach Mucosa stomach
7 chr1:171284000-171312200 Weak transcription Brain Hippocampus Middle brain
8 chr1:171284200-171294400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:171284200-171294600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:171284200-171295400 Weak transcription Esophagus oesophagus
11 chr1:171284200-171295800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:171284200-171307400 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:171284200-171313600 Weak transcription Right Ventricle heart
14 chr1:171284200-171313800 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:171286800-171309200 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:171288200-171293800 Strong transcription Liver Liver
17 chr1:171288400-171313000 Weak transcription Gastric stomach
18 chr1:171288600-171299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:171288600-171303000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:171288600-171303800 Weak transcription Fetal Muscle Leg muscle
21 chr1:171288600-171312400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:171289400-171299400 Weak transcription Stomach Smooth Muscle stomach
23 chr1:171289400-171301000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:171289400-171309600 Weak transcription Primary B cells from cord blood blood
25 chr1:171289400-171313400 Weak transcription Fetal Lung lung
26 chr1:171289600-171294800 Weak transcription Primary hematopoietic stem cells blood
27 chr1:171289600-171295600 Weak transcription Lung lung
28 chr1:171289600-171309000 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr1:171289600-171309000 Weak transcription Pancreas Pancrea
30 chr1:171289600-171313000 Weak transcription Adipose Nuclei Adipose
31 chr1:171289800-171298000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:171289800-171298000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:171289800-171298200 Weak transcription Aorta Aorta
34 chr1:171289800-171299600 Weak transcription Rectal Smooth Muscle rectum
35 chr1:171289800-171300200 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:171289800-171300600 Weak transcription Primary T cells from cord blood blood
37 chr1:171289800-171309000 Weak transcription Spleen Spleen
38 chr1:171289800-171309200 Weak transcription Left Ventricle heart
39 chr1:171289800-171312600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:171289800-171313000 Weak transcription Duodenum Mucosa Duodenum
41 chr1:171290000-171308200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:171290000-171309200 Weak transcription Ovary ovary
43 chr1:171290200-171296000 Weak transcription Fetal Intestine Large intestine
44 chr1:171291000-171293400 Strong transcription Fetal Intestine Small intestine
45 chr1:171292200-171297000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015