The 2.0 version of rSNPBase

Variant report

Variant rs45589031
Chromosome Location chr9:104150916-104150917
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:104117800-104160000 Weak transcription Pancreas Pancrea
2 chr9:104139000-104156600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:104139200-104151400 Weak transcription Osteobl bone
4 chr9:104139400-104151600 Weak transcription NH-A brain
5 chr9:104142800-104151000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr9:104142800-104151000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr9:104144600-104156600 Weak transcription Aorta Aorta
8 chr9:104144800-104151400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr9:104144800-104159800 Weak transcription NHEK skin
10 chr9:104145800-104152000 Weak transcription Brain Substantia Nigra brain
11 chr9:104146800-104159800 Weak transcription Muscle Satellite Cultured Cells --
12 chr9:104147600-104156600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr9:104147600-104160200 Weak transcription Gastric stomach
14 chr9:104147800-104152800 Weak transcription Thymus Thymus
15 chr9:104147800-104160000 Weak transcription HSMMtube muscle
16 chr9:104148000-104151400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr9:104148000-104151400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr9:104148000-104152600 Weak transcription H9 Cell Line embryonic stem cell
19 chr9:104148000-104157600 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr9:104148000-104159400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr9:104148200-104151200 Weak transcription Primary B cells from cord blood blood
22 chr9:104148200-104151400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr9:104148200-104152000 Weak transcription Fetal Muscle Trunk muscle
24 chr9:104148200-104159800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr9:104148400-104153800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr9:104148400-104156600 Weak transcription Psoas Muscle Psoas
27 chr9:104148600-104152600 Weak transcription Ovary ovary
28 chr9:104148600-104153400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr9:104148800-104151400 Weak transcription H1 Cell Line embryonic stem cell
30 chr9:104148800-104151400 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr9:104148800-104152400 Weak transcription Brain Germinal Matrix brain
32 chr9:104148800-104153000 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr9:104149000-104151200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr9:104149000-104152000 Genic enhancers A549 lung
35 chr9:104149000-104160000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr9:104149000-104160000 Weak transcription Right Ventricle heart
37 chr9:104149200-104153600 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr9:104149200-104157600 Weak transcription Fetal Lung lung
39 chr9:104149200-104160000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr9:104149400-104151000 Weak transcription NHLF lung
41 chr9:104149400-104151800 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr9:104149400-104153600 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr9:104149400-104153600 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr9:104149400-104153600 Strong transcription Primary monocytes fromperipheralblood blood
45 chr9:104149400-104153600 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr9:104149400-104154200 Strong transcription Dnd41 blood
47 chr9:104149400-104158400 Weak transcription Fetal Heart heart
48 chr9:104149600-104153400 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr9:104149800-104151400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr9:104149800-104151600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015