Variant report

Variant rs45589333
Chromosome Location chr19:38713968-38713969
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38701400-38714600 Weak transcription Right Atrium heart
2 chr19:38702600-38714200 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr19:38702600-38714400 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:38702800-38714200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:38702800-38714400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:38705000-38714400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr19:38705000-38714400 Weak transcription Brain Substantia Nigra brain
8 chr19:38705400-38714000 Weak transcription NHDF-Ad bronchial
9 chr19:38705400-38714200 Weak transcription NH-A brain
10 chr19:38707600-38714000 Weak transcription Osteobl bone
11 chr19:38707800-38714200 Weak transcription HSMMtube muscle
12 chr19:38708000-38714000 Weak transcription A549 lung
13 chr19:38708400-38714000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr19:38708400-38714200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr19:38709400-38714000 Weak transcription Spleen Spleen
16 chr19:38709600-38714000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr19:38709800-38714000 Weak transcription Brain Hippocampus Middle brain
18 chr19:38710000-38714200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:38710200-38714400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr19:38711800-38714200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr19:38711800-38714400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr19:38712800-38714200 Enhancers H1 Cell Line embryonic stem cell
23 chr19:38713000-38714000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr19:38713000-38714000 Enhancers HUVEC blood vessel
25 chr19:38713000-38714400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr19:38713400-38714000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr19:38713600-38714000 Enhancers HUES48 Cell Line embryonic stem cell
28 chr19:38713600-38714000 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
29 chr19:38713600-38714000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr19:38713600-38714000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr19:38713600-38714200 Enhancers Cortex derived primary cultured neurospheres brain
32 chr19:38713600-38714200 Flanking Active TSS Fetal Brain Female brain
33 chr19:38713600-38714200 Bivalent Enhancer Fetal Heart heart
34 chr19:38713600-38714400 Flanking Bivalent TSS/Enh ES-I3 Cell Line embryonic stem cell
35 chr19:38713600-38714600 Flanking Active TSS Fetal Brain Male brain
36 chr19:38713600-38715600 Active TSS Brain Anterior Caudate brain
37 chr19:38713600-38715600 Flanking Active TSS Brain Germinal Matrix brain
38 chr19:38713800-38714000 Genic enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr19:38713800-38714000 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:38713800-38714000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
41 chr19:38713800-38714000 Bivalent/Poised TSS Primary T helper naive cells from peripheral blood blood
42 chr19:38713800-38714000 Flanking Active TSS Brain Cingulate Gyrus brain
43 chr19:38713800-38714000 Bivalent Enhancer GM12878-XiMat blood
44 chr19:38713800-38714000 Enhancers HMEC breast
45 chr19:38713800-38714000 Enhancers NHLF lung
46 chr19:38713800-38714200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
47 chr19:38713800-38714200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr19:38713800-38714200 Bivalent/Poised TSS Fetal Kidney kidney
49 chr19:38713800-38714200 Flanking Bivalent TSS/Enh Fetal Lung lung
50 chr19:38713800-38714200 Enhancers Hela-S3 cervix

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