The 2.0 version of rSNPBase

Variant report

Variant rs4562680
Chromosome Location chr1:169284312-169284313
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169257600-169284800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr1:169259600-169294400 Weak transcription Pancreas Pancrea
3 chr1:169260400-169310400 Weak transcription Fetal Stomach stomach
4 chr1:169264400-169294400 Weak transcription Left Ventricle heart
5 chr1:169265000-169320400 Weak transcription Aorta Aorta
6 chr1:169270200-169336400 Weak transcription Stomach Smooth Muscle stomach
7 chr1:169271800-169297200 Weak transcription Psoas Muscle Psoas
8 chr1:169273600-169312400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:169276800-169304600 Weak transcription Ovary ovary
10 chr1:169277000-169294600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:169277000-169306200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:169278000-169285800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:169279000-169288400 Weak transcription Brain Angular Gyrus brain
14 chr1:169279000-169291200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:169279000-169293800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:169279000-169295600 Weak transcription Adipose Nuclei Adipose
17 chr1:169279200-169287200 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:169279200-169296000 Weak transcription Primary T cells from cord blood blood
19 chr1:169280200-169304600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:169281600-169294400 Weak transcription Fetal Intestine Small intestine
21 chr1:169281600-169294400 Weak transcription Lung lung
22 chr1:169281600-169306600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:169281800-169295400 Weak transcription Primary hematopoietic stem cells blood
24 chr1:169282000-169285800 Weak transcription HUVEC blood vessel
25 chr1:169282000-169286000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:169282000-169288800 Weak transcription A549 lung
27 chr1:169282000-169289600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:169282000-169290600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:169282000-169293800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:169282000-169294600 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:169282000-169306800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:169282200-169293600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:169282200-169295800 Weak transcription NHEK skin
34 chr1:169282400-169289200 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:169282400-169295600 Weak transcription NH-A brain
36 chr1:169282800-169285800 Weak transcription Hela-S3 cervix
37 chr1:169283000-169290400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:169283200-169287200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr1:169283400-169293400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015