Variant report

Variant	rs4567965
Chromosome Location	chr2:21473394-21473395
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10197693	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10197800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10197924	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11682616	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11689154	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11690578	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12615034	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4665243	0.87[AMR][1000 genomes]
rs4665638	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55835632	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62133423	0.86[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21462200-21480800	Weak transcription	Aorta	Aorta
2	chr2:21468000-21473400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr2:21468600-21473400	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr2:21471800-21475000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr2:21472600-21473400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr2:21472600-21473600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr2:21472600-21473800	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr2:21472600-21473800	Weak transcription	Brain Germinal Matrix	brain
9	chr2:21473200-21474200	Enhancers	Brain Substantia Nigra	brain
10	chr2:21473200-21488800	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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