Variant report

Variant	rs4586236
Chromosome Location	chr12:119328561-119328562
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11069144	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11069149	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap]
rs11069150	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap]
rs11069192	1.00[EUR][1000 genomes]
rs11069193	1.00[EUR][1000 genomes]
rs11069194	1.00[EUR][1000 genomes]
rs11069199	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12228165	1.00[CEU][hapmap]
rs12230084	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12230120	1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4288812	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4362197	0.89[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7136869	1.00[EUR][1000 genomes]
rs7295839	1.00[EUR][1000 genomes]
rs7967353	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv930978	chr12:118866332-119450600	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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