Variant report

Variant	rs4603211
Chromosome Location	chr10:89819819-89819820
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11202639	0.85[YRI][hapmap]
rs11202641	0.80[AFR][1000 genomes]
rs11202643	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831940	chr10:89811247-89989199	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89802600-89822200	Weak transcription	Aorta	Aorta
2	chr10:89803400-89822000	Weak transcription	Psoas Muscle	Psoas
3	chr10:89814800-89820000	Weak transcription	Primary B cells from cord blood	blood
4	chr10:89818200-89822200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr10:89818600-89820400	Weak transcription	Spleen	Spleen
6	chr10:89818600-89822200	Weak transcription	Pancreas	Pancrea
7	chr10:89818800-89820600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr10:89819000-89822200	Enhancers	Dnd41	blood
9	chr10:89819400-89820000	Weak transcription	GM12878-XiMat	blood
10	chr10:89819400-89820800	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr10:89819400-89821200	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr10:89819400-89830400	Enhancers	Primary T cells from cord blood	blood
13	chr10:89819800-89820000	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr10:89819800-89820600	Enhancers	Fetal Thymus	thymus
15	chr10:89819800-89820800	Enhancers	Primary T helper naive cells from peripheral blood	blood
16	chr10:89819800-89821000	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr10:89819800-89821000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr10:89819800-89823200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr10:89819800-89826400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
20	chr10:89819800-89828200	Enhancers	Primary T cells fromperipheralblood	blood
21	chr10:89819800-89832800	Enhancers	Primary B cells from peripheral blood	blood

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