Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs160139	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs160265	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs177921	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs308251	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs455401	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs457217	1.00[ASN][1000 genomes]
rs459591	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs464051	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs466432	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs508175	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs509189	0.91[EUR][1000 genomes]
rs510216	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs522507	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs529389	0.88[EUR][1000 genomes]
rs531123	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs532077	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs533035	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs533120	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs535640	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7317163	0.90[EUR][1000 genomes]
rs7322020	0.90[EUR][1000 genomes]
rs78271	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869070	chr13:93347616-94286933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv2760298	chr13:93496826-93738391	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv900910	chr13:93582208-93680065	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93662400-93663400	Enhancers	HSMMtube	muscle

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