Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10804873	1.00[LWK][hapmap]
rs12498072	0.81[CHB][hapmap]
rs13072498	0.81[CHB][hapmap]
rs4398411	0.96[CEU][hapmap];0.86[CHB][hapmap];0.85[GIH][hapmap];0.94[TSI][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4498019	1.00[LWK][hapmap]
rs4626081	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6443569	0.81[CHB][hapmap]
rs6443571	0.82[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.92[TSI][hapmap]
rs6443574	0.81[CHB][hapmap]
rs6443576	0.81[CHB][hapmap]
rs6443580	0.81[CHB][hapmap]
rs6784107	0.81[CHB][hapmap]
rs6789294	0.81[CHB][hapmap]
rs6808415	0.81[CHB][hapmap]
rs7374783	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap]
rs7611115	0.96[CEU][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7624046	0.85[CHB][hapmap]
rs7624351	0.81[CHB][hapmap]
rs7626901	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7644458	0.81[CHB][hapmap]
rs9290665	0.81[CHB][hapmap]
rs9290666	0.84[CEU][hapmap]
rs9290668	0.81[CHB][hapmap]
rs9819505	0.81[CHB][hapmap]
rs9832846	0.86[CHB][hapmap];0.95[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4626080	AP2M1	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178482000-178507000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr3:178502000-178504600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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