The 2.0 version of rSNPBase

Variant report

Variant rs4644661
Chromosome Location chr11:87039467-87039468
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:87012000-87040400 Weak transcription Fetal Intestine Small intestine
2 chr11:87012800-87044200 Weak transcription Brain Hippocampus Middle brain
3 chr11:87014400-87047400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr11:87015600-87039800 Weak transcription Fetal Stomach stomach
5 chr11:87015800-87040800 Weak transcription Left Ventricle heart
6 chr11:87018000-87039800 Weak transcription Ovary ovary
7 chr11:87018000-87040000 Weak transcription Aorta Aorta
8 chr11:87018000-87042800 Weak transcription Lung lung
9 chr11:87018200-87040800 Weak transcription Small Intestine intestine
10 chr11:87020800-87039800 Weak transcription HMEC breast
11 chr11:87021600-87042400 Weak transcription HSMMtube muscle
12 chr11:87022000-87040600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr11:87025200-87039600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr11:87025400-87040800 Weak transcription Stomach Smooth Muscle stomach
15 chr11:87026400-87041000 Weak transcription Colon Smooth Muscle Colon
16 chr11:87027600-87043800 Weak transcription Fetal Kidney kidney
17 chr11:87028200-87041000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr11:87028400-87040000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr11:87030400-87040200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr11:87033000-87040400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr11:87033200-87039800 Weak transcription HUVEC blood vessel
22 chr11:87033200-87041400 Weak transcription Muscle Satellite Cultured Cells --
23 chr11:87033400-87040200 Weak transcription HepG2 liver
24 chr11:87033400-87040800 Weak transcription Primary hematopoietic stem cells blood
25 chr11:87033600-87039800 Weak transcription Brain Anterior Caudate brain
26 chr11:87033600-87041200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr11:87033600-87044200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:87033800-87040800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr11:87033800-87042800 Weak transcription Placenta Placenta
30 chr11:87035000-87041800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:87035400-87039800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr11:87036800-87040200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:87036800-87040600 Weak transcription Adipose Nuclei Adipose
34 chr11:87036800-87040800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr11:87036800-87046400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr11:87037400-87040600 Weak transcription Fetal Muscle Leg muscle
37 chr11:87037400-87042400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr11:87037600-87041200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr11:87038200-87040000 Weak transcription Fetal Lung lung
40 chr11:87038200-87040600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr11:87038800-87043600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr11:87039000-87040600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr11:87039200-87042400 Weak transcription Primary T cells from cord blood blood
44 chr11:87039200-87042600 Weak transcription Liver Liver

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Last update: Aug 31, 2015