The 2.0 version of rSNPBase

Variant report

Variant rs4654272
Chromosome Location chr1:246665082-246665083
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246653400-246666400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:246656000-246666000 Weak transcription HSMM muscle
3 chr1:246656000-246669200 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr1:246656000-246669200 Weak transcription Fetal Brain Male brain
5 chr1:246656000-246669400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:246656000-246669400 Weak transcription Fetal Intestine Small intestine
7 chr1:246656000-246669400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:246656200-246666400 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:246656200-246666400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:246656200-246666400 Weak transcription NH-A brain
11 chr1:246656200-246669000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:246656200-246669200 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr1:246656200-246669400 Weak transcription Fetal Stomach stomach
14 chr1:246659600-246668400 Weak transcription HepG2 liver
15 chr1:246660800-246665800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:246661000-246669000 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr1:246661200-246666000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:246661200-246667400 Weak transcription K562 blood
19 chr1:246661200-246668200 Weak transcription GM12878-XiMat blood
20 chr1:246661200-246669000 Weak transcription Primary B cells from peripheral blood blood
21 chr1:246661200-246669000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:246661200-246669200 Weak transcription Primary B cells from cord blood blood
23 chr1:246661200-246669400 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:246661200-246669400 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:246661600-246669400 Weak transcription Primary hematopoietic stem cells blood
26 chr1:246661800-246666000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:246662200-246666200 Weak transcription Lung lung
28 chr1:246662600-246669400 Weak transcription Fetal Thymus thymus
29 chr1:246662800-246669600 Weak transcription Esophagus oesophagus
30 chr1:246663200-246665400 Strong transcription Primary T cells from cord blood blood
31 chr1:246663800-246669400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:246664000-246669200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:246664000-246669800 Weak transcription Aorta Aorta
34 chr1:246664600-246669400 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:246664800-246665200 Enhancers HUVEC blood vessel
36 chr1:246664800-246665400 Enhancers Osteobl bone
37 chr1:246664800-246666800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:246664800-246669400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:246665000-246665400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:246665000-246665400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:246665000-246665800 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015