Variant report

Variant rs466399
Chromosome Location chr3:161091194-161091195
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:161088000-161091400 Active TSS Pancreatic Islets Pancreatic Islet
2 chr3:161089200-161091200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:161089200-161091200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
4 chr3:161089200-161091200 Active TSS Brain Angular Gyrus brain
5 chr3:161089200-161091200 Bivalent/Poised TSS Rectal Smooth Muscle rectum
6 chr3:161089600-161091200 Active TSS Fetal Brain Female brain
7 chr3:161089600-161091200 Flanking Active TSS Stomach Smooth Muscle stomach
8 chr3:161090200-161091200 Active TSS Fetal Brain Male brain
9 chr3:161090400-161091200 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
10 chr3:161090600-161091200 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
11 chr3:161090600-161091200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
12 chr3:161090600-161091200 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
13 chr3:161090600-161091200 Flanking Active TSS Brain Anterior Caudate brain
14 chr3:161090600-161091200 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
15 chr3:161090600-161091200 Bivalent Enhancer Fetal Heart heart
16 chr3:161090600-161091200 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
17 chr3:161090800-161091200 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
18 chr3:161090800-161091200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
19 chr3:161090800-161091200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
20 chr3:161090800-161091200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr3:161090800-161091200 Flanking Active TSS Brain Germinal Matrix brain
22 chr3:161090800-161091200 Enhancers Gastric stomach
23 chr3:161090800-161091200 Flanking Active TSS Stomach Mucosa stomach
24 chr3:161091000-161091200 Flanking Bivalent TSS/Enh ES-I3 Cell Line embryonic stem cell
25 chr3:161091000-161091200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr3:161091000-161091200 Flanking Active TSS H9 Cell Line embryonic stem cell
27 chr3:161091000-161091200 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
28 chr3:161091000-161091200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
29 chr3:161091000-161091200 Flanking Bivalent TSS/Enh iPS DF 6.9 Cell Line embryonic stem cell
30 chr3:161091000-161091200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr3:161091000-161091200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
32 chr3:161091000-161091200 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr3:161091000-161091200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr3:161091000-161091200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:161091000-161091200 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
36 chr3:161091000-161091200 Bivalent Enhancer Liver Liver
37 chr3:161091000-161091200 Flanking Active TSS Brain Cingulate Gyrus brain
38 chr3:161091000-161091200 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
39 chr3:161091000-161091200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
40 chr3:161091000-161091200 Enhancers Brain Substantia Nigra brain
41 chr3:161091000-161091200 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
42 chr3:161091000-161091200 Bivalent Enhancer Fetal Intestine Large intestine
43 chr3:161091000-161091200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
44 chr3:161091000-161091200 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
45 chr3:161091000-161091200 Active TSS Right Ventricle heart
46 chr3:161091000-161091800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood

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