The 2.0 version of rSNPBase

Variant report

Variant rs4667109
Chromosome Location chr2:187517655-187517656
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187456200-187533000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:187456600-187520000 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr2:187456800-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:187457200-187533800 Weak transcription Spleen Spleen
5 chr2:187458000-187529000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr2:187464800-187536200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr2:187465800-187529200 Weak transcription Dnd41 blood
8 chr2:187466800-187533200 Weak transcription Colonic Mucosa Colon
9 chr2:187467200-187528600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:187471600-187521000 Weak transcription Aorta Aorta
11 chr2:187476000-187519800 Weak transcription K562 blood
12 chr2:187476800-187536200 Weak transcription Fetal Brain Male brain
13 chr2:187482200-187533800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr2:187482800-187519600 Weak transcription Brain Anterior Caudate brain
15 chr2:187482800-187527800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:187482800-187533200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr2:187482800-187533600 Weak transcription Rectal Smooth Muscle rectum
18 chr2:187482800-187533800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:187482800-187533800 Weak transcription Psoas Muscle Psoas
20 chr2:187483400-187519800 Weak transcription Brain Hippocampus Middle brain
21 chr2:187486600-187531400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:187489400-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr2:187493800-187529200 Weak transcription Brain Substantia Nigra brain
24 chr2:187494200-187529200 Weak transcription Brain Germinal Matrix brain
25 chr2:187494200-187535800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:187494800-187531800 Weak transcription Brain Cingulate Gyrus brain
27 chr2:187495000-187534400 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr2:187500000-187519800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:187501000-187548400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr2:187502800-187533000 Weak transcription H9 Cell Line embryonic stem cell
31 chr2:187503400-187545000 Weak transcription Hela-S3 cervix
32 chr2:187504200-187529400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr2:187504800-187519800 Weak transcription Primary T cells fromperipheralblood blood
34 chr2:187505400-187522200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:187505400-187533400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:187505600-187527600 Weak transcription Fetal Heart heart
37 chr2:187505800-187528800 Weak transcription Stomach Mucosa stomach
38 chr2:187506400-187519800 Weak transcription Right Ventricle heart
39 chr2:187506400-187520000 Weak transcription Fetal Kidney kidney
40 chr2:187506600-187529600 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr2:187506600-187533400 Weak transcription NHLF lung
42 chr2:187506600-187537000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:187506800-187519600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr2:187507200-187529200 Weak transcription Fetal Brain Female brain
45 chr2:187507400-187529000 Weak transcription Primary T cells from cord blood blood
46 chr2:187507800-187529200 Weak transcription GM12878-XiMat blood
47 chr2:187507800-187546600 Weak transcription Small Intestine intestine
48 chr2:187508000-187518000 Weak transcription NHDF-Ad bronchial
49 chr2:187508000-187520000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:187508000-187529200 Weak transcription NHEK skin

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Last update: Aug 31, 2015