The 2.0 version of rSNPBase

Variant report

Variant rs2290083
Chromosome Location chr2:187533741-187533742
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187456800-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:187457200-187533800 Weak transcription Spleen Spleen
3 chr2:187464800-187536200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr2:187476800-187536200 Weak transcription Fetal Brain Male brain
5 chr2:187482200-187533800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:187482800-187533800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:187482800-187533800 Weak transcription Psoas Muscle Psoas
8 chr2:187489400-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:187494200-187535800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:187495000-187534400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:187501000-187548400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr2:187503400-187545000 Weak transcription Hela-S3 cervix
13 chr2:187506600-187537000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:187507800-187546600 Weak transcription Small Intestine intestine
15 chr2:187510800-187535000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr2:187511200-187536200 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr2:187511400-187546600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:187511600-187545000 Strong transcription Osteobl bone
19 chr2:187513800-187546800 Strong transcription NH-A brain
20 chr2:187514600-187546200 Strong transcription Placenta Placenta
21 chr2:187515200-187536200 Weak transcription Primary B cells from cord blood blood
22 chr2:187516400-187543600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:187516600-187535000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:187516600-187545400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr2:187518800-187547200 Strong transcription HUVEC blood vessel
26 chr2:187520000-187545000 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr2:187520200-187537000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:187521800-187533800 Weak transcription Aorta Aorta
29 chr2:187522000-187533800 Weak transcription Esophagus oesophagus
30 chr2:187523000-187546800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:187523200-187535800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:187523400-187537200 Strong transcription Fetal Intestine Large intestine
33 chr2:187525000-187543200 Weak transcription Thymus Thymus
34 chr2:187525400-187535000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:187525400-187541800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:187526600-187537200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:187527600-187537000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr2:187527600-187537400 Strong transcription HepG2 liver
39 chr2:187527600-187543600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr2:187527600-187546400 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr2:187527800-187536000 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr2:187527800-187536400 Strong transcription A549 lung
43 chr2:187527800-187536800 Strong transcription Primary hematopoietic stem cells blood
44 chr2:187527800-187537000 Strong transcription Adipose Nuclei Adipose
45 chr2:187527800-187537200 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr2:187527800-187542000 Strong transcription Skeletal Muscle Male skeletal muscle
47 chr2:187527800-187542000 Strong transcription HMEC breast
48 chr2:187527800-187544200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr2:187528000-187536400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr2:187528000-187543200 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015