The 2.0 version of rSNPBase

Variant report

Variant rs4668716
Chromosome Location chr2:11297647-11297648
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11298200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:11296200-11298200 Enhancers Lung lung
3 chr2:11296200-11298200 Enhancers Spleen Spleen
4 chr2:11296200-11299600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:11296200-11329400 Weak transcription Gastric stomach
6 chr2:11296200-11412600 Weak transcription Aorta Aorta
7 chr2:11296400-11297800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr2:11296400-11297800 Enhancers Primary T helper cells PMA-I stimulated --
9 chr2:11296400-11297800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr2:11296400-11298200 Enhancers Primary T cells fromperipheralblood blood
11 chr2:11296400-11298200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:11296400-11298200 Enhancers Duodenum Mucosa Duodenum
13 chr2:11296400-11298200 Enhancers Fetal Brain Male brain
14 chr2:11296400-11301000 Weak transcription GM12878-XiMat blood
15 chr2:11296400-11303600 Weak transcription HSMMtube muscle
16 chr2:11296400-11306400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr2:11296400-11307200 Weak transcription Thymus Thymus
18 chr2:11296400-11308600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr2:11296400-11309600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr2:11296400-11314200 Weak transcription H9 Cell Line embryonic stem cell
21 chr2:11296400-11314800 Weak transcription Primary hematopoietic stem cells blood
22 chr2:11296400-11315200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:11296400-11315200 Weak transcription Brain Substantia Nigra brain
24 chr2:11296400-11315400 Weak transcription Brain Angular Gyrus brain
25 chr2:11296400-11318800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:11296600-11297800 Enhancers Brain Inferior Temporal Lobe brain
27 chr2:11296600-11297800 Enhancers Skeletal Muscle Male skeletal muscle
28 chr2:11296600-11298200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:11296600-11300200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:11296600-11300600 Weak transcription Fetal Intestine Small intestine
31 chr2:11296600-11301000 Weak transcription Fetal Thymus thymus
32 chr2:11296600-11301800 Weak transcription Primary T cells from cord blood blood
33 chr2:11296600-11303600 Weak transcription Rectal Smooth Muscle rectum
34 chr2:11296600-11304000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:11296600-11306200 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr2:11296600-11315200 Weak transcription Brain Cingulate Gyrus brain
37 chr2:11296600-11315200 Weak transcription Brain Hippocampus Middle brain
38 chr2:11296600-11315200 Weak transcription NHDF-Ad bronchial
39 chr2:11296600-11319200 Weak transcription Fetal Lung lung
40 chr2:11296800-11298000 Enhancers Primary monocytes fromperipheralblood blood
41 chr2:11296800-11300800 Weak transcription Primary B cells from cord blood blood
42 chr2:11296800-11303600 Weak transcription Left Ventricle heart
43 chr2:11296800-11303800 Weak transcription Colon Smooth Muscle Colon
44 chr2:11296800-11304200 Weak transcription Esophagus oesophagus
45 chr2:11296800-11307800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:11296800-11308000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr2:11296800-11309200 Weak transcription Ovary ovary
48 chr2:11296800-11315000 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr2:11296800-11315200 Weak transcription Brain Anterior Caudate brain
50 chr2:11296800-11318200 Weak transcription A549 lung

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Last update: Aug 31, 2015