Variant report

Variant	rs466939
Chromosome Location	chr21:39993766-39993767
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs118331	0.82[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs460667	0.80[CHB][hapmap];0.82[CHD][hapmap]
rs462006	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs462365	1.00[EUR][1000 genomes]
rs463166	0.95[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.84[JPT][hapmap];0.91[ASN][1000 genomes]
rs463763	1.00[CEU][hapmap];0.91[ASN][1000 genomes]
rs463780	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39989200-39997600	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr21:39992600-39994200	Enhancers	Fetal Muscle Leg	muscle
3	chr21:39993200-39994400	Enhancers	Fetal Muscle Trunk	muscle
4	chr21:39993200-39994600	Enhancers	Aorta	Aorta
5	chr21:39993200-39995600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr21:39993200-39996600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr21:39993400-39994400	Weak transcription	Pancreas	Pancrea
8	chr21:39993600-39993800	Flanking Active TSS	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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