The 2.0 version of rSNPBase

Variant report

Variant rs4669447
Chromosome Location chr2:9878546-9878547
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9875000-9879200 Enhancers Primary T cells fromperipheralblood blood
2 chr2:9875000-9879200 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr2:9875000-9879400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr2:9875000-9879400 Enhancers Primary T helper cells PMA-I stimulated --
5 chr2:9875200-9878800 Weak transcription Colon Smooth Muscle Colon
6 chr2:9875200-9879000 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr2:9875200-9879000 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr2:9875200-9879000 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr2:9875200-9879000 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr2:9875200-9879400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr2:9875200-9879400 Enhancers Primary T helper cells fromperipheralblood blood
12 chr2:9875400-9879000 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr2:9875400-9879200 Enhancers Primary T cells from cord blood blood
14 chr2:9875800-9879200 Weak transcription Esophagus oesophagus
15 chr2:9876200-9878600 Weak transcription Duodenum Mucosa Duodenum
16 chr2:9876400-9878800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr2:9876800-9878600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr2:9877000-9879000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr2:9877000-9879200 Enhancers Fetal Muscle Leg muscle
20 chr2:9877400-9878800 Weak transcription Thymus Thymus
21 chr2:9877400-9885000 Weak transcription HMEC breast
22 chr2:9877600-9878600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr2:9877600-9878800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:9877600-9879000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:9877800-9880200 Enhancers Fetal Heart heart
26 chr2:9878000-9878600 Enhancers Rectal Mucosa Donor 29 rectum
27 chr2:9878000-9878800 Enhancers Skeletal Muscle Male skeletal muscle
28 chr2:9878000-9878800 Enhancers Skeletal Muscle Female skeletal muscle
29 chr2:9878000-9879000 Enhancers Rectal Mucosa Donor 31 rectum
30 chr2:9878200-9879000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:9878200-9879200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:9878200-9879200 Enhancers Fetal Muscle Trunk muscle
33 chr2:9878200-9879400 Enhancers Fetal Thymus thymus
34 chr2:9878200-9880200 Enhancers Fetal Lung lung
35 chr2:9878400-9878800 Weak transcription NHLF lung
36 chr2:9878400-9879000 Enhancers HSMMtube muscle
37 chr2:9878400-9879200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:9878400-9879200 Enhancers Adipose Nuclei Adipose
39 chr2:9878400-9879200 Enhancers Psoas Muscle Psoas
40 chr2:9878400-9879200 Enhancers NHDF-Ad bronchial
41 chr2:9878400-9879400 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr2:9878400-9879400 Enhancers Hela-S3 cervix
43 chr2:9878400-9879600 Enhancers Placenta Placenta
44 chr2:9878400-9879600 Enhancers Right Ventricle heart
45 chr2:9878400-9879600 Enhancers K562 blood
46 chr2:9878400-9880000 Enhancers Lung lung
47 chr2:9878400-9880000 Enhancers GM12878-XiMat blood
48 chr2:9878400-9880200 Enhancers Sigmoid Colon Sigmoid Colon
49 chr2:9878400-9881400 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015