Variant report

Variant	rs4695314
Chromosome Location	chr4:47932661-47932662
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11939959	1.00[AMR][1000 genomes]
rs4695313	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56672591	1.00[AMR][1000 genomes]
rs58776528	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73145971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73147911	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447039	chr4:47822266-48285222	Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
2	nsv1013947	chr4:47915527-48052824	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv537082	chr4:47915527-48052824	Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47929000-47932800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:47929000-47932800	Weak transcription	NH-A	brain
3	chr4:47929200-47932800	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr4:47929200-47932800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr4:47929200-47932800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr4:47929200-47932800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr4:47929200-47932800	Weak transcription	Liver	Liver
8	chr4:47929200-47932800	Weak transcription	Fetal Lung	lung
9	chr4:47929200-47932800	Weak transcription	Pancreas	Pancrea
10	chr4:47929200-47932800	Weak transcription	NHEK	skin
11	chr4:47929200-47933000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr4:47929200-47933000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr4:47929200-47933000	Weak transcription	Brain Germinal Matrix	brain
14	chr4:47929200-47933000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr4:47929200-47933000	Weak transcription	Stomach Mucosa	stomach
16	chr4:47929200-47933000	Weak transcription	HepG2	liver
17	chr4:47929200-47936200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:47929400-47932800	Weak transcription	Fetal Intestine Large	intestine
19	chr4:47932600-47934000	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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