Variant report

Variant	rs4707406
Chromosome Location	chr6:88474274-88474275
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10081086	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11967562	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6926956	0.85[AFR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9294389	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9344719	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9351130	0.86[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9359755	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9362442	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9450800	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88457800-88482400	Weak transcription	Placenta	Placenta
2	chr6:88467000-88475800	Weak transcription	Fetal Lung	lung
3	chr6:88472600-88475800	Weak transcription	HepG2	liver
4	chr6:88472800-88481600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr6:88474200-88479200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr6:88474200-88479400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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