Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:88409948..88412052-chr6:88470831..88474012,3	K562	blood:

Variant related genes	Relation type
ENSG00000135334	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10081086	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10944328	0.81[ASN][1000 genomes]
rs11967562	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12201350	0.89[ASN][1000 genomes]
rs12211280	0.81[ASN][1000 genomes]
rs13200115	0.81[ASN][1000 genomes]
rs13205684	0.88[ASN][1000 genomes]
rs2153019	0.83[ASN][1000 genomes]
rs2153020	0.83[ASN][1000 genomes]
rs28394465	0.81[ASN][1000 genomes]
rs4707403	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4707406	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62419489	0.81[ASN][1000 genomes]
rs6907816	0.81[ASN][1000 genomes]
rs6916761	0.90[ASN][1000 genomes]
rs6926956	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6941229	0.90[ASN][1000 genomes]
rs7738899	0.87[ASN][1000 genomes]
rs7754587	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9294389	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9344719	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9351130	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9359755	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9362441	0.87[ASN][1000 genomes]
rs9362442	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88457800-88482400	Weak transcription	Placenta	Placenta
2	chr6:88466800-88472000	Weak transcription	Spleen	Spleen
3	chr6:88467000-88475800	Weak transcription	Fetal Lung	lung
4	chr6:88470400-88472600	Enhancers	HepG2	liver
5	chr6:88471200-88472800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

Quick Search: