Variant report

Variant	rs6907816
Chromosome Location	chr6:88458752-88458753
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10081086	0.81[ASN][1000 genomes]
rs10944328	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11967562	0.81[ASN][1000 genomes]
rs12201350	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12202349	0.84[EUR][1000 genomes]
rs12211280	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13200115	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2325077	0.85[ASN][1000 genomes]
rs28394465	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58362651	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62419489	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6916761	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6926956	0.81[ASN][1000 genomes]
rs6941229	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9294388	0.86[ASN][1000 genomes]
rs9294389	0.81[ASN][1000 genomes]
rs9351130	0.81[ASN][1000 genomes]
rs9444542	0.86[ASN][1000 genomes]
rs9450800	0.81[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88456400-88465400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:88457800-88482400	Weak transcription	Placenta	Placenta
3	chr6:88458200-88465600	Weak transcription	HepG2	liver
4	chr6:88458400-88464000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr6:88458600-88462400	Weak transcription	Monocytes-CD14+_RO01746	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links