Variant report

Variant	rs4714043
Chromosome Location	chr6:37169627-37169628
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:36993719..36995482-chr6:37168035..37170817,2	K562	blood:
2	chr6:37137974..37142365-chr6:37169170..37171597,4	K562	blood:
3	chr6:37159957..37163284-chr6:37166694..37170488,3	K562	blood:
4	chr6:37169595..37171540-chr6:37173349..37175303,2	K562	blood:
5	chr6:37159019..37162838-chr6:37167718..37170821,3	K562	blood:

Variant related genes	Relation type
ENSG00000137193	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10155767	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16889502	1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[JPT][hapmap];1.00[MEX][hapmap];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16889514	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4714041	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4714042	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73415854	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9470528	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9470530	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9470533	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9470534	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37158200-37169800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr6:37167200-37179200	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr6:37167400-37173400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:37167600-37173600	Enhancers	Fetal Intestine Small	intestine
5	chr6:37167800-37169800	Weak transcription	Fetal Intestine Large	intestine
6	chr6:37168000-37173800	Enhancers	HepG2	liver
7	chr6:37168600-37171800	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr6:37168800-37171400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr6:37169000-37171600	Enhancers	Primary T cells fromperipheralblood	blood
10	chr6:37169200-37171600	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr6:37169200-37172600	Enhancers	Primary T helper cells fromperipheralblood	blood
12	chr6:37169200-37174000	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr6:37169400-37170000	Enhancers	Fetal Thymus	thymus
14	chr6:37169400-37170400	Enhancers	Colonic Mucosa	Colon
15	chr6:37169400-37171800	Enhancers	K562	blood
16	chr6:37169400-37173200	Enhancers	Rectal Mucosa Donor 31	rectum
17	chr6:37169400-37173400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr6:37169400-37173400	Enhancers	Duodenum Mucosa	Duodenum
19	chr6:37169400-37174200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
20	chr6:37169400-37174200	Enhancers	Primary T helper cells PMA-I stimulated	--
21	chr6:37169600-37169800	Enhancers	Dnd41	blood
22	chr6:37169600-37170000	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr6:37169600-37170000	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr6:37169600-37170600	Enhancers	Sigmoid Colon	Sigmoid Colon
25	chr6:37169600-37171000	Enhancers	Rectal Mucosa Donor 29	rectum
26	chr6:37169600-37171200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
27	chr6:37169600-37171400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
28	chr6:37169600-37171600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
29	chr6:37169600-37171800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
30	chr6:37169600-37172200	Enhancers	Primary T cells from cord blood	blood
31	chr6:37169600-37176200	Enhancers	Primary hematopoietic stem cells	blood

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