Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1011950	0.85[YRI][hapmap]
rs1018918	0.83[CEU][hapmap];0.96[YRI][hapmap]
rs10226098	0.80[AMR][1000 genomes]
rs10239296	0.87[CEU][hapmap];0.88[YRI][hapmap]
rs10256263	0.81[CEU][hapmap];0.92[YRI][hapmap]
rs10277757	0.87[CEU][hapmap]
rs10807808	0.83[CEU][hapmap];0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10950878	0.83[CEU][hapmap];0.92[YRI][hapmap]
rs10950879	0.87[CEU][hapmap]
rs12700308	0.83[CEU][hapmap];0.96[YRI][hapmap]
rs13231851	0.83[CEU][hapmap];0.93[YRI][hapmap]
rs1962775	0.83[CEU][hapmap];0.86[YRI][hapmap]
rs1962776	0.83[CEU][hapmap];0.92[YRI][hapmap]
rs2014193	0.83[CEU][hapmap];0.96[YRI][hapmap]
rs2189023	0.83[CEU][hapmap]
rs2214325	0.83[CEU][hapmap];0.93[YRI][hapmap]
rs2214326	0.83[CEU][hapmap]
rs4141347	0.83[CEU][hapmap];1.00[YRI][hapmap]
rs4582443	0.87[CEU][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6969900	0.83[CEU][hapmap];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7780746	0.83[CEU][hapmap]
rs7792944	0.83[CEU][hapmap];0.96[YRI][hapmap]
rs7801909	0.82[CEU][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9638792	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9639398	0.83[CEU][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018133	chr7:21740118-22055283	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv830922	chr7:21793386-21964675	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv933320	chr7:21840543-21882825	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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