Variant report

Variant	rs4732179
Chromosome Location	chr7:135873681-135873682
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10225343	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10954517	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1097145	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs12533021	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12539683	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17243535	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17243556	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs28447109	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4732178	0.89[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs4732183	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6950690	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7779031	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs834800	0.82[EUR][1000 genomes]
rs834801	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs834813	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs834814	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4732179	KIAA1549	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:135872200-135874000	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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