Variant report

Variant	rs4739098
Chromosome Location	chr8:64425797-64425798
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11774825	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs12546503	0.85[CEU][hapmap];0.95[CHB][hapmap];0.85[EUR][1000 genomes]
rs1431596	0.91[EUR][1000 genomes]
rs4739096	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7000642	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7007232	0.85[EUR][1000 genomes]
rs7013832	0.89[ASN][1000 genomes]
rs7830002	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs991782	0.82[CEU][hapmap];0.95[CHB][hapmap];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64409400-64428000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr8:64409600-64428000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:64423400-64426600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr8:64424400-64428000	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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